BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003D03LP1|AL425108
(1016 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig666 1975 0.0
>3x_Contig666
Length = 2037
Score = 1975 bits (995), Expect = 0.0
Identities = 1006/1009 (99%), Gaps = 1/1009 (0%)
Strand = Plus / Minus
Query: 6 gatcatactgagtagaatcctgttcataaactgaaatggcgtgttgcatatattcaggtg 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1385 gatcatactgagtagaatcctgttcataaactgaaatggcgtgttgcatatattcaggtg 1326
Query: 66 ttgggaaaattgcagtcaattttgtttctaaagaagtaaatagcctatcatagacttcac 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1325 ttgggaaaattgcagtcaattttgtttctaaagaagtaaatagcctatcatagacttcac 1266
Query: 126 tccaagtggatacttccacagaagacaacagtttgcccctgctaacatcttgtttcatca 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1265 tccaagtggatacttccacagaagacaacagtttgcccctgctaacatcttgtttcatca 1206
Query: 186 aagcagcacgtgaaatgagcacggtaatcaaattcaaaccgatacgcgatgtggtgatga 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1205 aagcagcacgtgaaatgagcacggtaatcaaattcaaaccgatacgcgatgtggtgatga 1146
Query: 246 aagaaacgttattattctgaatgacatttattagtagactcattacctccaaaaactctg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1145 aagaaacgttattattctgaatgacatttattagtagactcattacctccaaaaactctg 1086
Query: 306 ctgaactggataagaacgaaacaatgatcttcaaaaacacagattggaacaattccatct 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1085 ctgaactggataagaacgaaacaatgatcttcaaaaacacagattggaacaattccatct 1026
Query: 366 tcttcagttgatctttagtaggaagtggagtagtcttgtacgatgatatgacaatgacat 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 tcttcagttgatctttagtaggaagtggagtagtcttgtacgatgatatgacaatgacat 966
Query: 426 tcaaatgagaaagttccttgaagaagcagttgaaaagcttaatcttctcttctcttgaca 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 tcaaatgagaaagttccttgaagaagcagttgaaaagcttaatcttctcttctcttgaca 906
Query: 486 agaaattcataatacgtggcataatcttgatacctttgtcgaaagataagatggaaatga 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 agaaattcataatacgtggcataatcttgatacctttgtcgaaagataagatggaaatga 846
Query: 546 agggagaaacgtcaaaaccgtggtcctcaacgtgtagcgcctcccataattttgaactgt 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 agggagaaacgtcaaaaccgtggtcctcaacgtgtagcgcctcccataattttgaactgt 786
Query: 606 ccggctgttgaccggatctcaattgagcttctagttcaagcacttcttcgtaaacagttt 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 ccggctgttgaccggatctcaattgagcttctagttcaagcacttcttcgtaaacagttt 726
Query: 666 caatcaatgataaaatgaacttacggccaccagaacgggataaaactgtacgatggtcca 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 caatcaatgataaaatgaacttacggccaccagaacgggataaaactgtacgatggtcca 666
Query: 726 ctgaagaactcaaagcataagatgatcttcttcttttggcattgatatccacgccttgca 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ctgaagaactcaaagcataagatgatcttcttcttttggcattgatatccacgccttgca 606
Query: 786 aagattcagacacctcatctagggctgagcttgattgagaagacaacgctggagaatctt 845
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 605 aagattcagacacctcatctagggctgagcttgattgagaagacaacgctggagaatcct 546
Query: 846 ctttgtgagtkgggatttgtaattgctttcttggagcttttgagttcctagtagctgaga 905
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ctttgtgagttgggatttgtaattgctttcttggagcttttgagttcctagtagctgaga 486
Query: 906 ttttacccaagacaccctctttgggcattatccaacccacccttacttttctgtggtctt 965
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 485 ttttacccaagacaccctcttt-ggcattatccaacccacccttacttttctgtggtctt 427
Query: 966 tctttcgcaacggtaacagccttctcgacctgagattgcattctctgta 1014
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tctttcgcaacggtaacagccttctcgacctgagattgcattctctgta 378
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8696
Number of Sequences: 1807
Number of extensions: 8696
Number of successful extensions: 68
Number of sequences better than 1.0e-20: 1
length of query: 1016
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1000
effective length of database: 10,329,639
effective search space: 10329639000
effective search space used: 10329639000
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)